.. _pynest_examples:

PyNEST examples
===============

.. toctree::
   :maxdepth: 1
   :caption: Basic network examples

   ../auto_examples/one_neuron
   ../auto_examples/one_neuron_with_noise
   ../auto_examples/twoneurons
   ../auto_examples/balancedneuron
   ../auto_examples/recording_demo
   ../auto_examples/BrodyHopfield
   ../auto_examples/CampbellSiegert
   ../auto_examples/hh_psc_alpha
   ../auto_examples/hh_phaseplane
   ../auto_examples/gif_population
   ../auto_examples/gif_pop_psc_exp
   ../auto_examples/brette_gerstner_fig_2c
   ../auto_examples/brette_gerstner_fig_3d
   ../auto_examples/mc_neuron
   ../auto_examples/precise_spiking

.. toctree::
   :maxdepth: 1
   :caption: Synapse examples

   ../auto_examples/structural_plasticity
   ../auto_examples/gap_junctions_two_neurons
   ../auto_examples/gap_junctions_inhibitory_network
   ../auto_examples/evaluate_tsodyks2_synapse
   ../auto_examples/evaluate_quantal_stp_synapse
   ../auto_examples/clopath_synapse_spike_pairing
   ../auto_examples/clopath_synapse_small_network
   ../auto_examples/tsodyks_depressing
   ../auto_examples/tsodyks_facilitating
   ../auto_examples/urbanczik_synapse_example


.. toctree::
   :maxdepth: 1
   :caption: Rate neuron examples

   ../auto_examples/lin_rate_ipn_network
   ../auto_examples/rate_neuron_dm

.. toctree::
   :maxdepth: 1
   :caption: Random balanced network examples

   ../auto_examples/brunel_alpha_nest
   ../auto_examples/brunel_delta_nest
   ../auto_examples/brunel_siegert_nest
   ../auto_examples/brunel_exp_multisynapse_nest
   ../auto_examples/brunel_alpha_evolution_strategies

.. toctree::
   :maxdepth: 1
   :caption: Device usage examples

   ../auto_examples/testiaf
   ../auto_examples/repeated_stimulation
   ../auto_examples/multimeter_file
   ../auto_examples/sensitivity_to_perturbation
   ../auto_examples/plot_weight_matrices
   ../auto_examples/if_curve
   ../auto_examples/pulsepacket
   ../auto_examples/correlospinmatrix_detector_two_neuron
   ../auto_examples/sinusoidal_poisson_generator
   ../auto_examples/sinusoidal_gamma_generator
   ../auto_examples/cross_check_mip_corrdet
   ../auto_examples/intrinsic_currents_spiking
   ../auto_examples/intrinsic_currents_subthreshold

.. toctree::
   :maxdepth: 1
   :caption: Connection set algebra examples

   ../auto_examples/csa_example
   ../auto_examples/csa_spatial_example

.. toctree::
   :maxdepth: 1
   :caption: HPC benchmark

   ../auto_examples/hpc_benchmark

.. toctree::
   :maxdepth: 1
   :caption: Cortical microcircuit example

   Cortical microcircuit model (based on Potjans and Diesmann, 2014) <cortical_microcircuit_index>

.. toctree::
   :maxdepth: 1
   :caption: Spatially-stuctured networks examples

   ../auto_examples/spatial/conncomp
   ../auto_examples/spatial/conncon_sources
   ../auto_examples/spatial/conncon_targets
   ../auto_examples/spatial/connex
   ../auto_examples/spatial/connex_ew
   ../auto_examples/spatial/ctx_2n
   ../auto_examples/spatial/gaussex
   ../auto_examples/spatial/grid_iaf
   ../auto_examples/spatial/grid_iaf_irr
   ../auto_examples/spatial/grid_iaf_oc
   ../auto_examples/spatial/test_3d
   ../auto_examples/spatial/test_3d_exp
   ../auto_examples/spatial/test_3d_gauss